Faculty
Amor Menezes is an Assistant Professor in the Department of Mechanical and Aerospace Engineering at the University of Florida. He is the Science Principal Investigator of the five-year, multi-university, Center for the Utilization of Biological Engineering in Space (CUBES), a NASA Space Technology Research Institute in biomanufacturing for deep space exploration. He also leads the Systems Design and Integration Division of CUBES.
Dr. Menezes' research interests are in dynamical systems theory and control, with applications to the fields of systems biology and synthetic biology. He is an IEEE Senior Member. He was a 2015 Emerging Leader in Biosecurity and a 2015 fellow of the Synthetic Biology Leadership Excellence Accelerator Program.
He was an Associate Project Scientist in the California Institute for Quantitative Biosciences (QB3) at the University of California, Berkeley from 2016 to 2017, and a QB3 Postdoctoral Scholar from 2011 to 2016. He was a Research Fellow between 2010 and 2011 in the Department of Aerospace Engineering at the University of Michigan, where he received a Ph.D. as an NSERC Post-Graduate Scholar and Michigan Teaching Fellow in 2010, and a Master of Science in Engineering as a Milo E. Oliphant Fellow in 2006. He graduated from the University of Waterloo in 2005 with a Bachelor of Applied Science in Mechanical Engineering with Distinction, Dean's Honors (top 10%), and the Sandford Fleming Co-op Medal.
Postdoctoral Scholar
Dr. Aaron J. Berliner is a postdoctoral scholar at the University of California Berkeley, as well as the major domo of the NASA-funded Space Technology Research Institute (STRI) CUBES (Center for the Utilization of Biological Engineering in Space). He obtained both his Ph.D. in Bioengineering under Dr. Adam Arkin and his M.S. in Nuclear Engineering under Dr. Bernstein from UC Berkeley in 2022. Prior to this, he studied biomedical engineering, and synthetic & systems biology at Boston University. Dr. Berliner began his career at the NASA Ames Research Center under Dr John Hogan and Dr. John Cumbers, where he worked on projects involving 3D printing, bioelectrochemistry, and astrobiology. In 2013, he joined the Life Sciences group of Autodesk Research in San Francisco, working on diverse projects such as bioprinting, software engineering, synthetic virology, and DNA origami. Accepting that he had caught the “space bug,” he returned to academia to help establish CUBES and begin work on Crucible, an open-source reactor for space synthetic biology experiments.
With a strong background in bioengineering, nuclear engineering, and systems engineering, Dr. Berliner has made significant contributions to the field of Space Bioprocess Engineering (SBE), an interdisciplinary field integrating bioengineering principles to develop biotechnologies for long-term space missions. His primary focus has been designing a biomanufactory-driven reference mission architecture for human exploration of Mars, aiding space agencies in their mission planning by providing parametric designs on requirements and operational aspects driven by specific biological systems, including advanced life support, biological and chemical manufacturing, and in situ resource utilization (ISRU). Dr. Berliner's vision is to harness living systems to support off-world biomanufacturing, realizing the inherent mass, power, and volume advantages offered by biotechnology over traditional mechanical and chemical approaches. His expertise and commitment to the field in the integration of bioengineering into human space exploration has most recently been acknowledged with his acceptance of a lectureship at UC Berkeley in the new Program in Aerospace Engineering.
Graduate Student
Brendan obtained a B.S. in Horticulture from the University of Georgia in 2017 and graduated in 2019 with a dual M.S. in Crop and Soil Science and Sustainable Agriculture from the University of Georgia and Università degli Studi di Padova, respectively. He is presently working toward completion of a Ph.D. in Plant Science at Utah State University's Crop Physiology Laboratory. His graduate research work encompasses photobiological studies and development of novel resource supply, monitoring and control approaches for the plant root-zone in microgravity that are capable of sustaining multiple, successive plant generations.
Noah received a double B.S. in Biochemistry and Biology from the University of Wisconsin - Stevens Point in 2020. He is currently pursuing a Ph. D. in Plant Science as a graduate research assistant in the Crop Physiology Lab at Utah State University in Logan, Utah. Noah's interests include optimizing hydroponics systems and plant nutrition for efficient production in closed systems. Outside of CUBES, he enjoys backpacking, geocaching, and flying general aviation airplanes.
Undergraduate Student
Milan is an undergraduate student at Rice University studying Electrical and Computer Engineering with a Data Science & Systems specialization. He is interested in utilizing synthetic biology and environmental biotechnology and combining it with artificial intelligence to create sustainable methods of food production, mitigate issues caused by rapid climate change, and assist in deep space exploration.
At CUBES, he is currently working with Dr. Hilzinger to build a cyanobacteria pan genome and utilizing it to understand and analyze the evolution of important phenotypes across different variants (e.g. multicellularity) using machine learning.
Ishan is a 1st year undergraduate student studying Microbial Biology at UC Berkeley. He is passionate about biopharmaceuticals and its application across diverse fields of study, including in space exploration. Ishan is working under Dr. Hilzinger on the CUBES project to develop genetic tools in A. platensis for improved metabolic engineering. Additionally, he is investigating CRISPR/Cas-9 and its use in developing new plasmids for this bacterium.
Isaac Lipsky is a senior undergraduate student at UC Berkeley studying environmental science. In concert with Aaron Berliner, he is working on developing cost-benefit metrics for Mars surface operations. His interests include planetary science and the tantalizing prospect of Martian terraforming.
Eliana Matos is a highly motivated student pursuing her studies in Bioengineering, with a specific focus on cell and tissue engineering. She has experience working and volunteering with a myriad of organizations, which range from nonprofit hospitals to YMCA Camp Campbell. Here, she effectively applies her optimistic outlook and critical thinking skills. Throughout her undergraduate career, Eliana has explored a broad range of classes and clubs, delving into fields such as neurotechnology, health care advocacy, as well as advanced mathematics and sciences related to engineering. While she expresses an interest in the path towards medical school, she remains fascinated by the multitude of opportunities that bioengineering could potentially offer her. For instance, during her first year of college, she co-authored a research paper on the potential for bioengineering in space exploration, an experience that utterly astounded her. The prospect of integrating her major with space exploration filled her with an exhilarating sense of anticipation.
Eliana, as an individual, is extremely optimistic and consistently seeks the positive aspects in every situation. When she is passionate about a project, her perfectionism surfaces, propelling her to ensure that she executes every task to the best of her abilities. Eliana is willing to devote extra time to projects that pique her interest and often finds herself thrilled when encountering new challenges from which she can learn and grow. She places a high value on efficiency and aims to accomplish tasks correctly on the first attempt. Additionally, she prioritizes constructive criticism and communication, cherishing the opportunity to receive advice and learn new methods for tasks or adapt to new work environments.
Eliana also has a keen interest in applying what she has learned to make a positive impact on her community and the wider world.
Alumni
Joyleen is currently a freshman, studying aerospace engineering in the first ever class of that major at UC Berkeley. She was always interested in space exploration, which is why she joined CUBES with Aaron Berliner to work in the Systems Designs and Integration Division. Her other interests include tennis, reading, and adopting cats.
Alex is a second year Aerospace Engineering student at the University of Florida. He is working under Dr. Amor Menezes in the Systems Design and Integration division. He has been a member of CUBES since November 2018. He is interested optimizing mission parameters to minimize mission costs and increase viability. His work at the University of Florida also includes the applications of model-free control to space missions.
Cameran Casale is a second year undergraduate student at UC Berkeley studying bioengineering. She is currently working with Aaron Berliner in the Systems Design and Integration Division of CUBES. In her time at this lab, Cameran is interested in exploring different biological applications within space systems, such as the utilization of biologically derived materials in the development of nanoscale devices. When she's not in the lab or studying for school, Cameran is usually out playing beach volleyball or bass guitar.
Skyler Chan is studying Electrical Engineering and Computer Science at UC Berkeley, and he has wanted to become an astronaut since he was 3. In high school, he learned how to fly gliders, and was involved in various student-led space organizations. One of his goals is to make humanity an interplanetary species within our lifetime, and he joined CUBES to advance this mission. Currently, he builds in the Systems Design and Integration Division of CUBES. He is interested in exploring sustainable design on Mars, such as, how to build the first self-sufficient Martian cities. To Skyler, the idea that the choices we make designing the first Martian habitats today will have an impact on the future of humanity never gets old. In his free time, he can be found flying drones, PR-ing at the gym, and filming videos with friends.
Adam is from Elk Grove, CA, but was born in San Francisco and is well-accustomed to life in the Bay Area. He became interested in engineering when he was very little, building Lego sets and working on home construction projects with his uncle. Not knowing much about bioengineering coming into university, Adam tried learning about different disciplines alongside his initial classes and prioritized gaining skills over hyper-focusing on curriculum, which is where his passion for software engineering developed. His goal is to become a software engineer at a biotech company, so that he can use his programming skills and knowledge of biological systems in tandem to make software and tools that can help the next generation of scientists manipulate and visualize experiments in a more concise and efficient way. Outside of engineering, he loves making art (painting and drawing with any medium he can get his hands on), watching k-dramas and anime, cooking with his friends, and hiking. After graduation, he hopes to travel to places like South Korea and France to learn more about other cuisines and cultures. Adam believes that we all owe it to ourselves to try as many things as possible, so we can find out what we like and don't like to do, and of course where we are exceptional and what needs improvement.
Zain earned a BA in Planetary Science from UC Berkeley. He developed an interest in spaceflight at a young age watching launches at Cape Canaveral. Even as a child he was interested in sustaining human life in space. He hopes to live to see the day when humanity has a permanent Mars colony. On top of his interest in space, Zain has an interest in medicine and hopes to eventually be a physician-scientist. He discovered his interest in medicine after taking biochemistry classes, where he became fascinated by the interconnected chemistry of the human body. In the future, Zain plans to attend medical school and apply in depth knowledge of human biology to space colonization efforts. He joined CUBES just after graduating from UC Berkeley in May 2022. At CUBES, he helps define states for bioastronautics software under Aaron Berliner. In his free time, Zain likes to make music on his guitar and piano, hike, and volunteer with the American Lung Cancer Screening Initiative.
Saige is a fourth year at the University of Florida studying Aerospace Engineering. She is working with Dr. Amor Menezes under the Systems Design and Integration division. She is interested in the effects of space travel on biological systems and using alternative solutions to mitigate problems cause by long term missions.
Avery is a third year undergraduate student at UC Berkeley, currently working towards a double major in Economics and Molecular and Cell Biology with an emphasis in developmental genetics. She is interested in how the intersection of her two academic disciplines come together to further the research behind space exploration. In CUBES, Avery is working towards optimizing an elemental balance in a martian biomanufacturing system. Previously, Avery worked at the University of Michigan on research relating to metabolic control in the immune system and the development of new drugs for the treatment of autoimmunity and cancer.
In the future, Avery would like to pursue a career in the biotechnology industry.
Davian is a second year Berkeley undergrad studying Electrical Engineering and Computer Science. In CUBES, he is working on the interface for space resource modeling software. Davian is also investigating phages in the gut microbiome as part of ENIGMA, and makes vector graphics.
Mia Mirkovic is a second-year undergraduate student in the Electrical Engineering and Computer Sciences department at the University of California, Berkeley pursuing mixed-signal processing and circuit design. Her interests include systems modeling and control, imaging, representation theory, modern music technology and history, and radio.
She works with Aaron Berliner on the development of Crucible, an open-source, 3D-printable chamber for space synthetic biology experiments, and mathematical models for Martian in-situ resource utilization for life support, power, and an integrated, multi-function, multi-organism bio-manufacturing system to produce fuel, food, and materials. These models will likely underlie a software package for accelerating mission design and simulation.
Dr. Takashi Nakamura received his Ph.D. in Aeronautics and Astronautics from MIT and his B.S. in Aeronautical Engineering from the University of Tokyo. Currently, he is the manager of Space Exploration Technologies at Physical Sciences Inc. (PSI), and has been involved in numerous R&D programs sponsored by NSF, NASA, DoE and DoD.
Dr. Nakamura has been developing, with funding from the Air Force and NASA, a unique space solar power system for power generation, propulsion, materials processing, and plant lighting in space. This concept is based on the use of optical fibers for transmission of solar radiation, the concept Dr. Nakamura pioneered in 1976 while he was at Japan's Electrotechnical Laboratory. Dr. Nakamura is an Associate Fellow of AIAA, a member of AAS and Sigma Xi.
Fengzhe is an undergraduate at Beijing Jiaotong University and now an exchange student at UC Berkeley studying computer science. He is interested in data mining, deep learning and interdisciplinary tasks. In CUBES, Fengzhe mainly works on modeling deep learning methods in dynamic systems. Previously, he worked in a computer science lab at Peking University on an information retrieval and recommender system.
Tyler Wallentine is an undergraduate student at Utah State University pursuing Bachelor of Science degrees in biochemistry and biological engineering. Tyler is originally from Meridian, Idaho and comes from a family of nine. He has a passion for space exploration and wants to see the establishment of a Martian colony within his lifetime. He intends to apply his education in engineering and chemistry to help in this endeavor. His interests include chemical engineering, space system development, and environmental biotechnology. He enjoys 3D design and printing, both as a hobby and as a means of accomplishing his engineering goals. He intends to pursue a Ph.D. in bioengineering following his undergraduate studies to further progress towards a research career.
Tyler is currently working with the Microbial Media and Feedstocks Division (MMFD) of NASA CUBES. He has been continuing development of an anaerobic photobioreactor for Rhodopseudomonas palustris NifA*. He is also evaluating the effectiveness of R. palustris to utilize planetary base wastewater to grow and perform nitrogen fixation, to maximize in-situ resource utilization.
Tyler is an avid runner, having participated in both track and cross country in high school. During that time, he ran a marathon and has a personal mile record of 4:44. He also boxes in his free time. He enjoys drawing, painting, and graphic design. He also enjoys movies, camping, and writing.
Spencer is a senior at UC Berkeley studying MCB and astrophysics. He joined CUBES in October 2021 and is currently working with Aaron Berliner on an examination of habitability in black hole accretion disks. Outside of astrobiology, Spencer is interested in music and education, and helps direct an organization providing free college admissions prep to communities in the Bay Area. In his spare time, Spencer likes to read, play piano, and game.
Cindy is a second-year undergrad at UC Berkeley studying computer science. She is interested in applying CS skills to space research. At CUBES, she is working on building object oriented models to simulate and optimize a biologically-driven Mars exploration mission. Outside of academics, she practices Wushu (Chinese martial arts) and goes on spontaneous adventures to the beach.